publications list

• A DNA Amplicon Sequence Data Processing and Analysis Pipeline for Environmental Microbiomes

  authors
  • Kathryn F. Atherton¹,
  • Michael Silverstein,
  • Chikae Tatsumi,
  • Corinne Vietorisz,
  • Jennifer M. Bhatnagar
  • ¹Boston University

• Soil Coring for Rocky New England Soils

  authors
  • Grady Welsh¹,
  • Lara Roelofs,
  • Shersingh Joseph Tumber-Dávila
  • ¹Dartmouth College

• CAMbank: Saliva Collection (crude, v1)

  authors
  • Eliah G Overbey¹,
  • Jaume Puig²,
  • Jeremy Wain Hirschberg³,
  • JangKeun Kim⁴,
  • Christopher E Mason
  • ¹University of Austin (UATX);Weill Cornell Medicine;BioAstra
  • ²BioAstra
  • ³Weill Cornell Medicine
  • ⁴Weill Cornell Medicine;BioAstra

• Enrichment and Extraction of Phytoplasma DNA from Field Samples for Whole-Genome Sequencing

  authors
  • Zala Kogej Zwitter¹,
  • Denis Kutnjak²,
  • Natasa Mehle³
  • ¹National Institute of Biology; Jozef Stefan International Postgraduate School
  • ²National Institute of Biology
  • ³National Institute of Biology; School for Viticulture and Enology

• GETCampy Sequencing protocols

  authors
  • Ben Pascoe¹,
  • Henry Badji²,
  • Madison Goforth,
  • Evangelos Mourkas³,
  • Evariste Bako⁴,
  • Isidore Bonkoungou,
  • Modeste T Gampene,
  • M Edith M Nikiema,
  • Barthélemy S Zoma,
  • Ousman E Bah,
  • Eustacia J Cassell,
  • Abdoulie K Ceesay,
  • Bubcarr E Ceesay,
  • Ousman Ceesay,
  • Ousman Ceesay,
  • Bakary Conteh,
  • Lamin Drammeh,
  • Binta Faye,
  • Abdoulie F Jalllow,
  • Fatima Jallow,
  • Ousman Jallow,
  • Samba Juma Jallow,
  • Pa Modou Joof,
  • Modou Kandeh,
  • Mehrab Karim,
  • Jarra Manneh,
  • Abdou Ceesay⁵,
  • Ebrima Fofana,
  • Mamud Jallow,
  • Modou B Jarju,
  • Samba Ba⁶,
  • Dodou Sanyang,
  • Demba B Jallow⁷,
  • Mukaila I Alebiosu⁸,
  • Akosua Bonsu Karikari,
  • Atanyiwoen Brusah⁹,
  • Courage KS Saba,
  • Kaisa Haukka¹⁰,
  • Catherine Matilda Collins¹¹,
  • Adrian W Leach,
  • Polina Levontin,
  • Shani UP Ali¹²,
  • Frances M Colles¹³,
  • Matthew Hitchings,
  • Martin Antonio,
  • Abdul Karim Sesay,
  • Ozan Gundogdu¹⁴,
  • Jahangir Hossain,
  • Samuel K Sheppard,
  • Bubacarr E Ceesay¹⁵,
  • Bubacarr E. Ceesay¹⁶
  • ¹Ineos Oxford Institute for Antimicrobial Research, Department of Biology, University of Oxford, Oxford, United Kingdom
  • ²Medical Research Council (UK) Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul, The Gambia
  • ³Zoonosis Science Center, Department of Medical Sciences, Uppsala University, Uppsala, Sweden
  • ⁴Laboratory of Molecular Biology, Epidemiology and Monitoring of Bacteria and Virus Transmitted by Food (LaBESTA), University Joseph KI-ZERBO, 03 BP 7021 Ouagadougou 03, Burkina Faso
  • ⁵Department of Livestock Services, Banjul, The Gambia
  • ⁶Regional health Directorate, Upper River Region, Ministry of Health, The Gambia
  • ⁷National Agricultural Research Institute, The Gambia
  • ⁸Department of Clinical Microbiology, School of Medicine, University for Development Studies, Tamale, Ghana
  • ⁹Faculty of Biosciences, Department of Biotechnology. University for Development Studies, Tamale,Ghana
  • ¹⁰Department of Microbiology, University of Helsinki, Helsinki, Finland
  • ¹¹Centre for Environmental Policy, Imperial College London, The Weeks Building, 16-18 Princes Gardens, London SW7 1NE, United Kingdom
  • ¹²Milner Centre for Evolution, Department of Life Sciences, University of Bath, Bath, UK
  • ¹³Department of Biology, University of Oxford, Oxford, United Kingdom
  • ¹⁴Department of Infection Biology, Faculty of Infectious & Tropical Diseases, London School of Hygiene and Tropical Medicine
  • ¹⁵Medical Research Council at the London School of Hygiene and Tropical Medicine
  • ¹⁶Medical Research Council Unit, The Gambia, at London School of Hygiene and Tropical Medicine