May 18, 2020

Public workspaceTutorial to use the Galaxy/coral SNP STAGdb workflow

This protocol is a draft, published without a DOI.
  • Iliana Baums1,
  • Sheila Kitchen1,
  • Greg vonKustner1
  • 1Pennsylvania State University
  • Coral Genotyping Protocols
Iliana Baums
Icon indicating open access to content
QR code linking to this content
External link: https://coralsnp.science.psu.edu/galaxy/
Protocol Citation: Iliana Baums, Sheila Kitchen, Greg vonKustner 2020. Tutorial to use the Galaxy/coral SNP STAGdb workflow. protocols.io https://protocols.io/view/tutorial-to-use-the-galaxy-coral-snp-stagdb-workfl-beqcjdsw
Manuscript citation:
Kitchen SA, Von Kuster G, Kuntz KL, Reich HG, Miller W, Griffin S, Fogarty ND, Baums I. STAGdb: a 30K SNP genotyping array and Science Gatew ay for Acropora corals and their dinoflagellate symbionts. https://doi.org/10.1101/2020.01.21.914424
License: This is an open access protocol distributed under the terms of the Creative Commons Attribution License,  which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited
Protocol status: In development
We are still developing and optimizing this protocol
Created: April 07, 2020
Last Modified: May 18, 2020
Protocol Integer ID: 35300
Keywords: galaxy coral snp stagdb, coral snp stagdb, tutorial, workflow, galaxy
Abstract
Tutorial to use the Galaxy coral SNP STAGdb workflow https://coralsnp.science.psu.edu/galaxy
Attachments
Icon for coralsnp_tutorial_sk.pdf
coralsnp_tutorial_sk...
1.1MB
Troubleshooting