
| Product | Quantity | Part # | |
| Transcreener® ADP2 FI Assay | 200 assays* | 3013-A | |
| 1,000 assays* | 3013-1K | ||
| 10,000 assays* | 3013-10K |
| Component | Composition | Notes | |
| ADP2 Antibody–IRDye® QC-1 | 1.4 mg/mL* solution in 100 mM KH2PO4 (pH 8.5) | The concentration of antibody needed for an enzyme target is dependent upon the ATP concentration and buffer conditions in the enzyme reaction (see Section 4.2). Sufficient antibody is included in the kit to complete 200 assays (Part # 3013-A), 1,000 assays (Part # 3013-1K), or 10,000 assays (Part # 3013-10K) at an ATP concentration up to 100 µM. Note: The Antibody IR-Dye QC-1 can have precipitate upon thawing. If so,spin down the precipitate and continue using the supernatant in the assay.The antibody will perform as directed. | |
| ADP Alexa Fluor® 594 Tracer | 800 nM solution in 2 mM HEPES (pH 7.5) containing 0.01% Brij-35 | The final tracer concentration in the reaction is 4 nM. | |
| Stop & Detect Buffer B, 10X | 200 mM HEPES (pH 7.5), 400 mM EDTA, and 0.2% Brij-35 | The Stop & Detect Buffer B components will stop enzyme reactions that require Mg2+. To ensure that the enzyme reaction is stopped completely, confirm that the EDTA concentration is at least equimolar to the magnesium ion concentration in the reaction. The final concentration of Stop & Detect Buffer B at the time of FI measurement is 0.5X. | |
| ATP | 5 mM | The ATP supplied in this kit can be used for the enzyme reaction and to create an ADP/ATP standard curve, if desired. | |
| ADP | 5 mM | ADP is used to create the ADP/ATP standard curve. |
| Plate Reader | Excitation Filter/Bandwidth | Emission Filter/Bandwidth | Mirror Module | Other Parameters | |
| Envision (Perkin Elmer) | 545 nm/7 nm (Cat. # 2100-5070) | 635 nm/15 nm (Cat. # 2100-5590) | D595 | Mirror: Texas Red FP single mirror Cat. # 2100-4190 | |
| PHERAstar Plus (BMG Labtech) | 580 nm/10 nm | 620 nm/10 nm | NA | ||
| Safire2 (Tecan) | 580 nm/10 nm | 620 nm/10 nm | NA | Monochromator-based | |
| SpectraMax M2 (Molecular Devices) | 584 nm | 612 nm | NA | Emission filter auto-cutoff at 610 nm |
| Component | Stock Concentration | Final Concentration | Example: 25 Assays | Your Numbers | |
| ADP2 Antibody–IRDye® QC-1 | 1.4 mg/mL | 5 µg/mL | 1.8 µL | ||
| 10X Stop & Detect Buffer B | 10X | 0.5X | 25.0 µL | ||
| ADP Alexa Fluor® 594 Tracer | 800 nM | 4 nM | 2.5 µL | ||
| Water | 470.7 µL | ||||
| Total | 500.0 µL |
| Component | Stock Concentration | Final Concentration | Example: 25 Assays | Your Numbers | |
| 10X Stop & Detect Buffer B | 10X | 0.5X | 25.0 µL | ||
| ADP Alexa Fluor® 594 Tracer | 800 nM | 4 nM | 2.5 µL | ||
| Water | 472.5 µL | ||||
| Total | 500.0 µL |
| Component | Notes | |
| 0% ATP Conversion Control | This control consists of the ADP Detection Mixture, the enzyme reaction components (without enzyme), and 100% ATP (0% ADP). It defines the upper limit of the assay window. | |
| 100% ATP Conversion Control | This control consists of the ADP Detection Mixture, the enzyme reaction components (without enzyme), and 100% ADP (0% ATP). It defines the lower limit of the assay window. | |
| Minus-Nucleotide Control and Minus-Substrate Control | To verify that the enzyme does not interfere with the detection module, perform an enzyme titration in the absence of nucleotide (i.e., ATP) or acceptor substrate. | |
| ADP/ATP Standard Curve | Although optional, an ADP/ATP standard curve can be useful to ensure day-to-day reproducibility and that the assay conditions were performed using initial rates. It can also be used to calculate product formed and inhibitor IC50 values. See Section 7.2 for a description of how to run the standard curve. | |
| Background Control | Use only 0.5X enzyme reaction conditions and Stop & Detect Buffer B. |
| Component | 1 µM | 10 µM | 100 µM | Your Numbers | |
| ADP2 Antibody–IRDye® QC-1 | 11.6 µL | 71.4 µL | 669.3 µL | ||
| ADP Alexa Fluor® 594 Tracer | 100 µL | 100 µL | 100 µL | ||
| 10X Stop & Detect Buffer B | 1,000 µL | 1,000 µL | 1,000 µL | ||
| Water | 8,888.4 µL | 8,828.6 µL | 8,230.7 µL | ||
| Total | 10,000 µL | 10,000 µL | 10,000 µL |
| A | B | C | D | |
| ATP | 1 µM | 10 µM | 100 µM | |
| ADP2Antibody–IRDye® QC-1 | 1.63 µg/mL | 10 µg/mL | 93.7 µg/mL |
| Component | Notes | |
| Minus Antibody (Free Tracer) Control | This control contains the ADP Alexa Fluor® 594 Tracer without the ADP2 Antibody–IRDye® QC-1 and determines the maximum RFU value achievable. | |
| Minus Tracer Control | This control contains the ADP2 Antibody–IRDye® QC-1 without the ADP Alexa Fluor® 594 Tracer and is used as a sample blank. It contains the same antibody concentration in all wells. |
| Problem | Possible Causes and Solutions | |
| Low selectivity | Suboptimal antibody concentration
| |
| No change in FI observed | Low antibody/tracer activity
| |
| High background signal | Nonproductive ATP hydrolysis
|
| % Conv. | ATP (µM) | ADP (µM) | |
| 100 | 0 | 100 | |
| 60 | 40 | 60 | |
| 40 | 60 | 40 | |
| 30 | 70 | 30 | |
| 20 | 80 | 20 | |
| 15 | 85 | 15 | |
| 10 | 90 | 10 | |
| 8.0 | 92 | 8.0 | |
| 6.0 | 94.0 | 6.0 | |
| 4.0 | 96.0 | 4.0 | |
| 2.0 | 98.0 | 2.0 | |
| 0 | 100 | 0 |