Jun 30, 2020

Public workspaceProtocols from Sales et al. (2020) Rubisco activity: challenges and opportunities of NADH-linked microtiter plate-based and 14C-based assays V.1

  • 1Lancaster Environment Centre, Lancaster University, Library Avenue, Lancaster, LA1 4YQ, UK;
  • 2Biosystems & Integrative Sciences Institute (BioISI), Science Faculty of Lisbon University, Lisbon, 1749-016, Portugal
Icon indicating open access to content
QR code linking to this content
Collection CitationCristina Rodrigues Gabriel Sales, Anabela Silva, Elizabete Carmo-Silva 2020. Protocols from Sales et al. (2020) Rubisco activity: challenges and opportunities of NADH-linked microtiter plate-based and 14C-based assays. protocols.io https://dx.doi.org/10.17504/protocols.io.bf8djrs6
Manuscript citation:
Sales CRG, Silva AB, Carmo-Silva E. 2020. Measuring Rubisco activity: challenges and opportunities of NADH-linked microtiter plate-based and 14C-based assays. Journal of Experimental Botany, https://doi.org/10.1093/jxb/eraa289
License: This is an open access collection distributed under the terms of the Creative Commons Attribution License,  which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited
Protocol status: Working
We use this protocol and it's working
Created: May 11, 2020
Last Modified: June 30, 2020
Collection Integer ID: 36837
Keywords: dPGM, enzyme activity assay, GAPDH-GlyPDH, NADH, PEPC-MDH, PK-LDH, Rubisco, microtiter plate,
Abstract
This collection of protocols includes four assays for measuring Rubisco activity that are used and discussed in the manuscript "Rubisco activity: challenges and opportunities of NADH-linked microtiter plate-based and 14C-based assays" (Sales et al. 2020).

Three of the protocols are NADH-linked microtiter plate-based assays for Rubisco activity that use alternative coupling enzymes:
1. GAPDH-GlyPDH, glyceraldehyde-3-phosphate-dehydrogenase and glycerolphosphate-dehydrogenase;
2. PEPC-MDH, phosphoenolpyruvate-carboxylase and malate-dehydrogenase;
3. PK-LDH, pyruvate-kinase and lactate-dehydrogenase.

The radiometric assay for Rubisco activity measures the incorporation of 14CO2 into 3-phosphoglycerate (3-PGA).

The fifth protocol describes the purification of 2,3-bisphosphate-dependent phosphoglycerate mutase (dPGM), which is required for the NADH-linked microtiter plate-based assays 2 (PEPC-MDH) and 3 (PK-LDH).
Guidelines
Please, check each protocols for detailed guidelines.
Files
Protocol
Icon representing the file 14CO2-based assay for measuring Rubisco activity & activation state
Name
14CO2-based assay for measuring Rubisco activity & activation state
Version 1
, Wild Bioscience
Cristina Rodrigues Gabriel SalesWild Bioscience
Protocol
Icon representing the file NADH-linked microtiter plate-based assay for measuring Rubisco activity & activation state – GAPDH-GlyPDH
Name
NADH-linked microtiter plate-based assay for measuring Rubisco activity & activation state – GAPDH-GlyPDH
Version 1
, Wild Bioscience
Cristina Rodrigues Gabriel SalesWild Bioscience
Protocol
Icon representing the file NADH-linked microtiter plate-based assay for measuring Rubisco activity & activation state – PEPC-MDH
Name
NADH-linked microtiter plate-based assay for measuring Rubisco activity & activation state – PEPC-MDH
Version 1
, Wild Bioscience
Cristina Rodrigues Gabriel SalesWild Bioscience
Protocol
Icon representing the file NADH-linked microtiter plate-based assay for measuring Rubisco activity & activation state – PK-LDH
Name
NADH-linked microtiter plate-based assay for measuring Rubisco activity & activation state – PK-LDH
Version 1
, Wild Bioscience
Cristina Rodrigues Gabriel SalesWild Bioscience
Protocol
Icon representing the file Purification of 2,3-bisphosphate-dependent phosphoglycerate mutase (dPGM)
Name
Purification of 2,3-bisphosphate-dependent phosphoglycerate mutase (dPGM)
Version 1
, Wild Bioscience
Cristina Rodrigues Gabriel SalesWild Bioscience