Jan 15, 2018

Public workspaceField survey of the population dynamics of common ragweed (Ambrosia artemisiifolia) V.2

  • 1University of Fribourg, Switzerland;
  • 2Radboud University, The Netherlands;
  • 3INRA, Univ. Bourgogne Franche-Comté, France;
  • 4University of Natural Resources and Life Sciences, Vienna, Austria;
  • 5Slovak University of Agriculture in Nitra
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Protocol CitationSuzanne STE Lommen, Caspar A. Hallmann, Bruno Chauvel, Melinda Leitsch-Vitalos, Gerhard Karrer, Peter Tóth, Heinz Müller-Schärer, Eelke Jongejans 2018. Field survey of the population dynamics of common ragweed (Ambrosia artemisiifolia). protocols.io https://dx.doi.org/10.17504/protocols.io.mmyc47w
License: This is an open access protocol distributed under the terms of the Creative Commons Attribution License,  which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited
Protocol status: Working
We use this protocol and it's working
Created: January 15, 2018
Last Modified: March 28, 2018
Protocol Integer ID: 9624
Keywords: Demography, annual plant, Asteraceae, ragweed, field survey, permanent plots, soil seed bank, EU COST Action SMARTER, Task Force Population Dynamics, Ophraella communa
Abstract
Background: Common ragweed, Ambrosia artemisiifolia L., is an economically important worldwide plant invader, due to its huge production of seeds and allergenic pollen, while its range and impact are expected to increase in future. Knowledge of the population dynamics of this annual species is essential to understand what factors drive spatio-temporal variation in population growth, and can help assessing efficacy of management interventions at the population level. Detailed demographic surveys over multiple years are labour-intensive, but when multiple research groups join forces and work according to standardized protocols, it may be feasible to collect such in-depth data in multiple habitat types across a large geographic range and over larger time spans.
Aim: We developed this field survey protocol to monitor the population dynamics of common ragweed (Ambrosia artemisiifolia L., Asteraceae) across Europe. It is designed to estimate all vital rates of a population (establishment of plants, plant survival, plant growth, reproduction, and seed survival), and study how they relate to plant density and individual plant size. It targets unmanaged field populations (to create a baseline), but could also be used for assessing managed populations with some adaptations.
Methods: Plots of 0.25m2 are established in a field population of common ragweed. The population, plots and (randomly selected) marked common ragweed plants within these are monitored early in the growing season and are re-assessed at seed set, when in addition soil samples and reproductive plants are collected (adjacent to but outside the plots) for further analysis in the laboratory. Repeating the procedure on the same plots in multiple years is essential to derive estimates of seed survival in the soil seed bank from year to year. Replicated monitoring in time (multiple years) and/or space (multiple populations), and measuring (additional) environmental factors, is needed to relate the dynamics to environmental variables.      
Protocols provided: i) list of materials, ii) the selection of a site, iii) setting up the survey, iv) monitoring, v) sampling of plants, soil and seeds, vii) lab analyses of samples (plant biomass, soil seed bank, soil texture and content, cleaning of aerial seed samples)
Record forms provided: i) for registration of meta-data of the site, ii) for all measures taken in the field and in the lab; all in a pdf-version for printout to use in the field and in an excel-version for digitising data
Other material provided: i) field sheets (checklist for field work, legend to the record forms), ii) help tools (for mapping plants, for assigning unique numbers to plants)
Optimisation: The protocol has been used to monitor over 50 populations across the European continent in 2014-2016 by members of the SMARTER Task Force Population Dynamics, within the framework of the EU-funded COST Action 'SMARTER' (FA1203, ‘Sustainable management of Ambrosia artemisiifolia in Europe’, 2013-2016). By yearly Task Force meetings, the protocol has been evaluated and improved to the current version.
Guidelines
The pdf 'Protocols...' contains an introduction and overview of the study design and includes detailed protocols for all steps.
In short: 
  • The study has been developed for populations of common ragweed, Ambrosia artemisiifolia
  • The protocols are based on the phenology of the species in Europe
  • The study was designed to estimate all vital rates of a single population (establishment of plants, plant survival, plant growth, reproduction, and seed survival), and study how they relate to plant density and individual plant size in that population.
  • As this is an annual plant species with a seed bank, estimates of seed survival can only be made when the monitoring is performed during 2 consecutive years. Note that this estimate is age-independent.
  • The protocol targets unmanaged field populations (to create a baseline), but could also be used for assessing managed populations with some adaptations.
  • It does include, however, measures of plant damage and presence of natural enemies, in particular of the ragweed leaf beetle Ophraella communa, a candidate biocontrol agent for ragweed in Europe which is already used for biocontrol on other continents.
  • The protocol assumes no migration of seeds, and therefore does not provide methods to assess movement, immigration or emigration of seeds. The selection of sites is based on this requirement.
  • The protocol monitors plants in (permanent) plots of 0.25 m2 representing the range of densities of common ragweed at the site (in order to study the effect of plant density). Hence, the plots are not entirely randomly selected and are therefore not the optimal representation of the site.
  • Approximate time (but this is highly dependent on the population and the local conditions) needed for 2 people per population per year (excluding time needed to select a suitable population and to travel):
  • 1 day to set up the site and collect meta-data (in the first year, after that 1-4 hours, depending on the need for additional plots)
  • 1 day field monitoring after establishment, early during vegetative growth
  • 1 day field monitoring and sampling during seed set
  • (0.5-1 day for each optional additional field census)
  • 1-2 days lab analysis
  • 0.5 day digital data entry
  • If interested in explaining the dynamics, replicates in time (multiple years) and/or space (multiple populations) are required, and we recommend measuring/obtaining additional environmental variables (e.g. weather, soil moisture) as well as more data on vegetation composition.
  • This publication provides:
  • detailed protocols for conducting the study: pdf 'Protocols...'
  • forms for collection of meta-data of a population: pdf 'Form_Ambrosia_Population_Record' for printout and use in the field, and excel 'DigitalForm_Ambrosia_Population_Record' for digitisation
  • record forms for data collection in the field and the lab: pdf 'RecordForms...' for printout and use in the field, excel 'DigitalRecordForms...' to digitisation for standardized further processing of data
  • field sheets with a summary of the setup and the guidelines for the standardized measures: pdf 'FieldSheets...'
  • help tools that can assist tagging and refinding individual plants in the field: pdf 'Help-tools
  • Note: The current version on protocols.io (Version 2) has a corrected author name, an improved abstract and clearer guidelines, but the protocol itself has not changed.  
Materials
MATERIALS
ReagentSee the protocol for lists of material needed in the field and equipment needed for lab analyses of samples. Materials and equipment are pretty basic and are generally present in ecological laboratories.
Safety warnings
  • The wind-dispersed pollen of the study species are highly allergenic. Mind to take care of personal protection when monitoring during pollen release.
  • The study species is invasive on many continents, and has a quarantine status in some countries. Please avoid dispersing seeds after monitoring and ensure complying with local/national/international laws when transporting plants and/or seeds.
Before start
  • Read the pdf document 'Protocols ....'.   
  • We have experienced that the selection of suitable populations, and obtaining permisison to work on-site, can be very time-consuming. We recommend reserving plenty of time for this.
  • The protocol has been developed for a 3-year field survey of an international work group, the SMARTER Task Force Population Dynamics, within the framework of the European EU-funded COST Action 'SMARTER' (FA1203, ‘Sustainable management of Ambrosia artemisiifolia in Europe’, 2012-2016). Members of the Task Force have used it to collect demographic data on >50 populations across the European continent in 2014-2016, and have collected corresponding seed samples for the SMARTER Ambrosia Samples Bank at the University of Fribourg, Switzerland. During the project, the protocol has yearly been evaluated and improved by the Task Force. The currect protocol is the public version of the last version (V5, 2015). The protocol can surely be further improved and refined, and should carefully be adapted to the purpose of future users.
  • The joint study of the SMARTER Task Force Population Dynamics has ended, so new users can neglect information about sending data or material to the SMARTER project. The email address SMARTER@unifr.ch is not used anymore, and the website www.ragweed.eu has been archived within the website of the International Ragweed Society http://internationalragweedsociety.org/smarter/. The archive of the website of the Task Force Population Dynamics can be found at http://internationalragweedsociety.org/smarter/task-forces/task-force-population-dynamics/
  • People that still want to contribute seed samples to the SMARTER Ambrosia Samples Bank can contact Prof. Heinz Müller-Schärer of the University of Fribourg (Heinz.Mueller@unifr.ch).
  • For all questions about the SMARTER Task Force Population Dynamics or about the protocol, please contact Suzanne Lommen at suzannelommen@hotmail.com
Select a suitable population
Select a suitable population
Summary: Populations need to fulfill a set of requirements in order to be suitable to be monitored by this protocol (e.g. sufficient numbers of common ragweed plants, sufficient surface covered by the population)
Details: See Protocol Selection & registration population, 'Checklist for suitability of site' (Protocols are found in the pdf 'Protocols...')
Duration00:00:00 unpredictable, can take days to find & arrange
Registration of the population (record meta-data of the site, only once per population)
Registration of the population (record meta-data of the site, only once per population)
Summary: record meta-data of the site
Details: See Protocol Selection & registration population, 'Registration of populations'
Record form: Form_Ambrosia_Population_Record (printable field version as pdf)
Digital form: DigitalForm_Ambrosia_Population_Record (excel file for digitisation of data)
Duration00:40:00
Setup the site
Setup the site
Summary: in the first year permanent plots within the site are selected for monitoring, and their position recorded. Plots for soil sampling are chosen, and a photo reference point is defined. In consecutive years the same plots are re-assessed, and if necessary, additional plots are set up.
Timing (very important!): The site should be set up when you expect that the majority of the germinated seeds have been established as seedlings/young plants, but are still small (several pairs of true leaves, plant height max. 30 cm).
Details: See Protocol Setup site
Record forms: Form_1_site-map, Form_2_plot-map
Other forms: Field_sheet_1_Checklist-field-work, Field_sheet_2_Legend-to-forms
Duration08:00:00 full day first year, max. few hours in next years
Census Establishment (census e)
Census Establishment (census e)
Summary: the site and the plots are monitored, and individual plants within plots are marked and measured.
Timing (very important!): immediately or shortly after having set up the site. The census should be executed when you expect that the majority of the germinated seeds have been established as seedlings/young plants, but are still small (several pairs of true leaves, plant height max. 30 cm).
Details: See Protocol Census Establishment
Record forms: Form_3_monitor-study-area, Form_4_monitor-plot (14 or more copies needed)
Other forms: Field_sheet_1_Checklist-field-work, Field_sheet_2_Legend-to-forms, help_tool_plant-map, your completed  Form_2_Plot-map  
Duration08:00:00 a full day
Optional: Extra censi (census x1 and x2)
Optional: Extra censi (census x1 and x2)
Summary: extra monitoring after the Census Establishment to follow the individually marked plants at smaller time intervals (ca. each month). It is equal to the protocol Census Seed set hereafter, but without the sampling.
Details: See Protocol Census Extra
Record forms: Form_3_monitor-study-area, Form_4_monitor-plot (14 or more copies needed)
Other forms: Field_sheet_1_Checklist-field-work, Field_sheet_2_Legend-to-forms,
your completed help_tool_plant-map, your completed  Form_2_Plot-map  
Duration04:00:00 2-8 hours per census
Census Seed set (census s)
Census Seed set (census s)
Summary: the site, the plots, and the individually marked plants are re-assessed. Soil samples are taken around the plots for estimates of the soil seed bank, and 21 matured plants are sampled from outside the plots for estimates of reproduction.
Timing (very important!): The census should be executed around seed set: as soon as possible after all female reproductive structures have been formed, but before seeds ripen, and before plants dry out
Details: See Protocol Census Census Seed set
Record forms: Form_3_monitor-study-area, Form_4_monitor-plot (14 or more copies needed), Form_5_plants-outside-plots
Other forms: Field_sheet_1_Checklist-field-work, Field_sheet_2_Legend-to-forms,
your completed help_tool_plant-map, your completed  Form_2_Plot-map  
Duration08:00:00 a full day
Optional: Collection of aerial seeds
Optional: Collection of aerial seeds
Summary: optional but recommended collection of seeds directly from the plants (to store for future research)
Timing: During census Seed set or any time later when seeds are ripe and can easily be collected from the plants
Details: See Protocol Aerial seed collection
Duration00:30:00 15-60 minutes depending on protocol chosen
Optional: extra census (census x4)
Optional: extra census (census x4)
Summary: extra monitoring after the Census Seed set to monitor the individually marked plants once more (e.g. to assess their decay). It is equal to the protocol Census Seed set, but without the sampling.
Details: See Protocol Census Extra
Record forms: Form_3_monitor-study-area, Form_4_monitor-plot (14 or more copies needed)
Other forms: Field_sheet_1_Checklist-field-work, Field_sheet_2_Legend-to-forms,
your completed help_tool_plant-map, your completed  Form_2_Plot-map  
Duration04:00:00 2-8 hours
Lab analyses of samples
Lab analyses of samples
Summary: processing, measuring and storing of the field samples.
Four protocols are available: 
I. Analyse plant samples - Assess biomass
II. Analyse plot soil samples - Assess the seed soil bank
III. Analyse extra soil sample - Assess soil content and soil texture
IV. Process and send the seed sample
Details: See Protocol Lab Analysis samples
Record forms: Form_6_soil-samples
Other forms: Field_sheet_2_Legend-to-forms
Duration12:00:00 1-2 days
Digitise data from step 3-9
Digitise data from step 3-9
Summary: digitising data collected in step 3-9
Details: Data that have been collected in steps 3-9 and have been recorded manually on Record Forms 1-6 can all be digitized in one excel file 'DigitalRecordForms...', which groups data at different organisational levels. Detailed instructions for filling out the data can be found on the first work sheet. The format has been designed for further (standardized) processing of data in R. Use one file for each population and for each year.
Digital form: excel file 'DigitalRecordForms...' 
Duration04:00:00
Next year
Next year
Repeat step 3-10 each year of the study, have fun!