Aug 10, 2024
CDPH modified Artic v3 primers for SARS-CoV-2 sequencing
- 1California Dept. of Public Health
Protocol Citation: John Bell 2024. CDPH modified Artic v3 primers for SARS-CoV-2 sequencing. protocols.io https://dx.doi.org/10.17504/protocols.io.x54v92w5pl3e/v1
License: This is an open access protocol distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited
Protocol status: Working
We use this protocol and it's working
Created: August 03, 2024
Last Modified: August 10, 2024
Protocol Integer ID: 104646
Keywords: artic v3 primers for sar, artic v3 primer, protocol lists the primer bed file, primer bed file, modified artic v3, artic v3, sequencing, sar, primer
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Abstract
This protocol lists the primer bed file for a modified Artic v3 set for SARS-CoV-2 sequencing. Two primers have been added to reduce dropouts.
The attached bed file is a modified Artic v3 primer location list for SARS-CoV-2, used for sequencing by California Dept. of Public Health Viral and Rickettsial Disease Laboratory during the COVID-19 pandemic.
CDPH_VRDL_Artic_v3.alt.bed10KB