AptaFluor SAH Methyltransferase TR-FRET Assay: 100 assays (Part # 3023-1B), 1,000 assays (Part # 3023-1K), 10,000 assays (Part # 3023-10K).
- SAM: 500 μM. SAM supplied in the kit should be used for MT enzyme reactions and to create a SAM/SAH standard curve.
- SAH: 500 μM. SAH is used to create a SAM/SAH standard curve.
- Enzyme Stop Reagent, 10X: 6% sodium dodecylsulfate (SDS). Enzyme Stop Reagent is diluted to 1X in SAH Detection Buffer and used to quench the activity of MT enzyme components.
- SAH Detection Buffer, 10X: 200 mM Tris (pH 8.5), 200 mM MgCl₂, 3M NaCl, 0.2 % Brij-35, 10 mM urea. This buffer is used to prepare the SAH Detection Mix and the Enzyme Stop Mix.
- P1-Biotin: 5 μM. P1-Biotin is a 55-base RNA oligomer with a biotin molecule at the 5’ end. It is incubated with Tb-Streptavidin to produce P1-Terbium, the donor piece of the SAH aptamer.
- P2-Dylight 650: 5 μM. P2-Dylight 650 is an 18-base RNA oligomer with a Dylight 650 molecule at the 3’ end. It is the acceptor piece of the SAH aptamer.
- Tb-Streptavidin: 2 μM. Tb-Streptavidin is used to produce the Tb-labeled (donor) piece of the SAH aptamer.
- Conjugation Buffer, 1X: —. This buffer is used for the P1-Biotin/Tb-Streptavidin conjugation reaction.
Materials Required but Not Provided:
- Ultrapure Water: Some deionized water systems are contaminated with nucleases that can degrade both nucleotide substrates, RNA aptamers, and products, reducing assay performance. Careful handling and use of ultrapure water eliminates this potential problem.
- Methyltransferase Enzyme(s): AptaFluor assays are designed for use with purified enzyme preparations. Contaminating enzymes can produce background signal and reduce the assay window.
- Enzyme Buffer Components: User-supplied enzyme buffer components include enzyme, buffer, acceptor substrate, MgCl₂, or MnCl₂, EGTA, Brij-35, and test compounds.
- Plate Reader: A microplate reader configured to measure TR-FRET is required for the assay. See Table 1 for information on suitable instruments.
- Assay Plates: It is important to use low-volume assay plates that are entirely white, with a nonbinding surface. We recommend Corning® 384-well plates (Cat. # 4513) or 96-well plates (Cat. # 3642).
- Liquid Handling Devices: Use liquid handling devices that can accurately dispense a minimum volume of 0.5 μL into 384-well plates.